You can always modify the sales tax rate on a single charge by going to Admin > Manage > Charges, finding the charge in question, and editing the default tax rate on it.

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Keep in mind that if your state or city tax rates change, you are also able to bulk-change your rates for all impacted charges. Go to Admin > Manage > Charge list, and on the right select the button to "Bulk Update Tax Rates":

This will pop up a window that allows you to select which rates you want to change (if you have multiple tax rates):

Set the new rate and it will apply to all charges that used the selected rates.